Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lyttr dna-binding domain-containing protein | SAMN02910353_02461 | Not Available | + | 2841766 - 2842224 | 17987.8 |
| hypothetical protein | SAMN02910353_02462 | Not Available | + | 2842221 - 2842646 | 15680.8 |
| hypothetical protein | SAMN02910353_02463 | Not Available | + | 2842680 - 2843591 | 34930.6 |
| adp-ribosylglycohydrolase | SAMN02910353_02464 | Not Available | + | 2843641 - 2844450 | 30723.0 |
| leucine rich repeat-containing protein | SAMN02910353_02465 | Not Available | - | 2844863 - 2847931 | 111669.0 |
| protein-tyrosine phosphatase | SAMN02910353_02466 | Not Available | - | 2848205 - 2848663 | 16884.1 |
| cupin domain-containing protein | SAMN02910353_02467 | Not Available | - | 2848750 - 2849088 | 13078.2 |
| hypothetical protein | SAMN02910353_02468 | Not Available | + | 2849398 - 2850213 | 30847.9 |
| Trna-leu | Not Available | Not Available | + | 2850514 - 2850600 | Not Available |
| transglutaminase-like superfamily protein | SAMN02910353_02470 | Not Available | - | 2850974 - 2853769 | 101442.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.