Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | SAMN02910353_00160 | Not Available | + | 171930 - 172580 | 23702.8 |
| 16s ribosomal rna . bacterial ssu | Not Available | Not Available | + | 172099 - 172375 | 18.01 |
| uncharacterized membrane protein | SAMN02910353_00161 | Not Available | + | 172699 - 173217 | 19556.9 |
| diguanylate cyclase (ggdef) domain-containing protein | SAMN02910353_00162 | Not Available | - | 173252 - 175042 | 67073.8 |
| predicted purr-regulated permease perm | SAMN02910353_00163 | Not Available | + | 175363 - 176625 | 46803.6 |
| formate c-acetyltransferase | SAMN02910353_00164 | Not Available | + | 176630 - 178753 | 80105.7 |
| hypothetical protein | SAMN02910353_00165 | Not Available | + | 178746 - 178958 | 7364.47 |
| glycine radical | SAMN02910353_00166 | Not Available | + | 178971 - 179210 | 9023.75 |
| putative abc transport system permease protein | SAMN02910353_00167 | Not Available | - | 179299 - 182304 | 111453.0 |
| trna g18 (ribose-2'-o)-methylase spou | SAMN02910353_00168 | Not Available | + | 182434 - 183249 | 29855.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.