Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02451 | Not Available | + | 2829996 - 2833859 | 149843.0 |
| hypothetical protein | SAMN02910353_02452 | Not Available | + | 2833873 - 2835816 | 74831.1 |
| pd-(d/e)xk nuclease superfamily protein | SAMN02910353_02453 | Not Available | + | 2835930 - 2836493 | 21873.3 |
| hypothetical protein | SAMN02910353_02454 | Not Available | + | 2837501 - 2837839 | 13567.8 |
| 3-oxoacid coa-transferase subunit a | SAMN02910353_02455 | Not Available | + | 2837905 - 2838588 | 26504.3 |
| macro domain-containing protein | SAMN02910353_02456 | Not Available | + | 2838604 - 2838882 | 9520.35 |
| putative rna 2'-phosphotransferase | SAMN02910353_02457 | Not Available | + | 2839263 - 2839817 | 21416.5 |
| hypothetical protein | SAMN02910353_02458 | Not Available | + | 2839830 - 2840450 | 24707.0 |
| hypothetical protein | SAMN02910353_02459 | Not Available | + | 2840458 - 2840940 | 18819.0 |
| hypothetical protein | SAMN02910353_02460 | Not Available | + | 2841057 - 2841755 | 26481.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.