Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02441 | Not Available | + | 2813937 - 2817008 | 114334.0 |
| hypothetical protein | SAMN02910353_02442 | Not Available | + | 2817019 - 2817912 | 33078.4 |
| hypothetical protein | SAMN02910353_02443 | Not Available | + | 2817915 - 2818319 | 15924.8 |
| uncharacterized conserved protein yegl, contains vwa domain of tery type | SAMN02910353_02444 | Not Available | + | 2818383 - 2819147 | 27897.0 |
| hypothetical protein | SAMN02910353_02445 | Not Available | + | 2819256 - 2819723 | 17370.8 |
| protein phosphatase 2c | SAMN02910353_02446 | Not Available | + | 2819720 - 2820430 | 26614.3 |
| serine/threonine protein kinase | SAMN02910353_02447 | Not Available | + | 2820411 - 2821871 | 55320.1 |
| superfamily i dna and/or rna helicase | SAMN02910353_02448 | Not Available | + | 2821868 - 2825191 | 126897.0 |
| hypothetical protein | SAMN02910353_02449 | Not Available | + | 2825175 - 2827277 | 80194.3 |
| hypothetical protein | SAMN02910353_02450 | Not Available | + | 2827279 - 2829990 | 105754.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.