Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine rich repeat-containing protein | SAMN02910353_02421 | Not Available | - | 2785956 - 2791076 | 184622.0 |
| uncharacterized conserved protein | SAMN02910353_02422 | Not Available | + | 2791813 - 2792937 | 42242.5 |
| atpase components of abc transporters with duplicated atpase domains | SAMN02910353_02423 | Not Available | + | 2793110 - 2794663 | 58764.7 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN02910353_02424 | Not Available | + | 2794709 - 2796454 | 64239.8 |
| nitroreductase | SAMN02910353_02425 | Not Available | + | 2796467 - 2797084 | 23281.0 |
| hypothetical protein | SAMN02910353_02426 | Not Available | + | 2797103 - 2797345 | 9195.79 |
| type i restriction enzyme, r subunit | SAMN02910353_02427 | Not Available | + | 2797346 - 2797994 | 25332.3 |
| fido, protein-threonine ampylation domain-containing protein | SAMN02910353_02428 | Not Available | + | 2798609 - 2799682 | 41384.6 |
| hypothetical protein | SAMN02910353_02429 | Not Available | - | 2799729 - 2800076 | 12534.6 |
| relaxase/mobilisation nuclease domain-containing protein | SAMN02910353_02430 | Not Available | - | 2800082 - 2800816 | 27516.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.