Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02381 | Not Available | - | 2727406 - 2727798 | 13584.4 |
| dna-binding protein hu-beta | SAMN02910353_02382 | Not Available | - | 2727820 - 2728095 | 9623.72 |
| atp-dependent clp protease atp-binding subunit clpb | SAMN02910353_02383 | Not Available | - | 2728301 - 2730901 | 96936.7 |
| hypothetical protein | SAMN02910353_02384 | Not Available | - | 2730951 - 2731595 | 24414.4 |
| protein of unknown function | SAMN02910353_02385 | Not Available | - | 2732209 - 2733531 | 44543.4 |
| protein of unknown function | SAMN02910353_02386 | Not Available | - | 2733630 - 2734367 | 27036.1 |
| vtc domain-containing protein | SAMN02910353_02387 | Not Available | - | 2734369 - 2735160 | 30677.9 |
| lysophospholipase l1 | SAMN02910353_02388 | Not Available | - | 2735339 - 2736448 | 40581.0 |
| hypothetical protein | SAMN02910353_02389 | Not Available | + | 2737085 - 2738005 | 33151.5 |
| hypothetical protein | SAMN02910353_02390 | Not Available | - | 2738547 - 2739521 | 33856.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.