Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lipid kinase, yegs/rv2252/bmru family | SAMN02910353_02370 | Not Available | + | 2718669 - 2719616 | 34726.3 |
| 1-phosphofructokinase | SAMN02910353_02371 | Not Available | - | 2719661 - 2720569 | 32658.1 |
| phosphomethylpyrimidine synthase | SAMN02910353_02372 | Not Available | - | 2720582 - 2721895 | 48211.3 |
| hydroxymethylpyrimidine/phosphomethylpyrimidine kinase | SAMN02910353_02373 | Not Available | - | 2722019 - 2722870 | 29659.4 |
| thiamine-phosphate pyrophosphorylase | SAMN02910353_02374 | Not Available | - | 2722867 - 2723508 | 22632.3 |
| thiamine-phosphate pyrophosphorylase | SAMN02910353_02375 | Not Available | - | 2723505 - 2724110 | 21702.3 |
| 2-iminoacetate synthase | SAMN02910353_02376 | Not Available | - | 2724103 - 2725353 | 47696.6 |
| thiazole synthase | SAMN02910353_02377 | Not Available | - | 2725505 - 2726275 | 27300.1 |
| sulfur carrier protein this adenylyltransferase | SAMN02910353_02378 | Not Available | - | 2726288 - 2726926 | 23317.0 |
| sulfur carrier protein | SAMN02910353_02379 | Not Available | - | 2726928 - 2727122 | 6930.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.