Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin | SAMN02910353_00150 | Not Available | - | 157048 - 157356 | 11246.6 |
| thioredoxin reductase (nadph) | SAMN02910353_00151 | Not Available | - | 157360 - 158226 | 30871.3 |
| energy-coupling factor transport system substrate-specific component | SAMN02910353_00152 | Not Available | - | 158362 - 161517 | 116661.0 |
| abc-type glycerol-3-phosphate transport system, substrate-binding protein | SAMN02910353_00153 | Not Available | - | 161673 - 164075 | 90682.1 |
| leucine rich repeat-containing protein | SAMN02910353_00154 | Not Available | + | 164427 - 166334 | 70347.5 |
| prephenate dehydrogenase | SAMN02910353_00155 | Not Available | + | 166444 - 167295 | 31471.6 |
| anaerobic ribonucleoside-triphosphate reductase activating protein | SAMN02910353_00156 | Not Available | - | 167348 - 167848 | 18384.6 |
| ribonucleoside-triphosphate reductase class iii catalytic subunit | SAMN02910353_00157 | Not Available | - | 167858 - 170176 | 86510.0 |
| gdsl-like lipase/acylhydrolase | SAMN02910353_00158 | Not Available | - | 170425 - 171285 | 31389.0 |
| uncharacterised protein family upf0547 | SAMN02910353_00159 | Not Available | + | 171502 - 171846 | 12772.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.