Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02330 | Not Available | + | 2665834 - 2666202 | 13706.3 |
| acetyltransferase (gnat) family protein | SAMN02910353_02331 | Not Available | + | 2666199 - 2666483 | 10696.2 |
| protein of unknown function | SAMN02910353_02332 | Not Available | + | 2666527 - 2667657 | 42121.8 |
| hypothetical protein | SAMN02910353_02333 | Not Available | + | 2667880 - 2669319 | 54749.5 |
| hypothetical protein | SAMN02910353_02334 | Not Available | + | 2669341 - 2669985 | 23709.1 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | SAMN02910353_02335 | Not Available | + | 2670000 - 2670674 | 24035.4 |
| 2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthase | SAMN02910353_02336 | Not Available | + | 2670686 - 2671162 | 16838.6 |
| trk system potassium uptake protein trka | SAMN02910353_02337 | Not Available | + | 2671471 - 2672829 | 49990.0 |
| trk system potassium uptake protein trkh | SAMN02910353_02338 | Not Available | + | 2672852 - 2674288 | 52500.6 |
| hypothetical protein | SAMN02910353_02339 | Not Available | + | 2674288 - 2674416 | 4727.68 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.