Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glutamate n-acetyltransferase | SAMN02910353_02317 | Not Available | + | 2655437 - 2656735 | 45113.0 |
| n-acetylglutamate kinase | SAMN02910353_02318 | Not Available | + | 2656832 - 2657698 | 30963.8 |
| acetylornithine/n-succinyldiaminopimelate aminotransferase | SAMN02910353_02319 | Not Available | + | 2657847 - 2659022 | 42252.4 |
| hypothetical protein | SAMN02910353_02320 | Not Available | + | 2659026 - 2659514 | 18477.2 |
| ornithine carbamoyltransferase | SAMN02910353_02321 | Not Available | + | 2659536 - 2660441 | 33575.7 |
| hypothetical protein | SAMN02910353_02322 | Not Available | + | 2660559 - 2661821 | 46617.3 |
| hypothetical protein | SAMN02910353_02323 | Not Available | + | 2661832 - 2662200 | 13350.5 |
| Trna-met | Not Available | Not Available | + | 2663149 - 2663225 | Not Available |
| helix-hairpin-helix motif-containing protein | SAMN02910353_02328 | Not Available | - | 2663330 - 2664046 | 25852.5 |
| metallo-beta-lactamase family protein | SAMN02910353_02329 | Not Available | - | 2664071 - 2665666 | 58847.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.