Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-lactate dehydrogenase | SAMN02910353_02307 | Not Available | + | 2646168 - 2647115 | 33858.4 |
| [fefe] hydrogenase h-cluster maturation gtpase hydf | SAMN02910353_02308 | Not Available | + | 2647195 - 2648397 | 43033.2 |
| protein of unknown function | SAMN02910353_02309 | Not Available | + | 2648394 - 2648792 | 14623.0 |
| argininosuccinate synthase | SAMN02910353_02310 | Not Available | + | 2648999 - 2650231 | 45472.2 |
| hypothetical protein | SAMN02910353_02311 | Not Available | + | 2650275 - 2651360 | 40833.1 |
| guanine deaminase | SAMN02910353_02312 | Not Available | + | 2651420 - 2651863 | 16474.6 |
| argininosuccinate lyase | SAMN02910353_02313 | Not Available | + | 2652307 - 2653692 | 51459.3 |
| hypothetical protein | SAMN02910353_02314 | Not Available | + | 2653696 - 2653971 | 10586.9 |
| n-acetyl-gamma-glutamyl-phosphate reductase | SAMN02910353_02315 | Not Available | + | 2654007 - 2654960 | 34995.8 |
| ribosomal protein s18 acetylase rimi | SAMN02910353_02316 | Not Available | + | 2654983 - 2655423 | 16636.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.