Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02277 | Not Available | + | 2601581 - 2608504 | 245024.0 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN02910353_02278 | Not Available | + | 2608760 - 2610139 | 53564.6 |
| hypothetical protein | SAMN02910353_02279 | Not Available | + | 2610105 - 2610854 | 28025.7 |
| coenzyme pqq synthesis protein d (pqqd) | SAMN02910353_02280 | Not Available | + | 2610860 - 2611120 | 9476.35 |
| hypothetical protein | SAMN02910353_02281 | Not Available | + | 2611113 - 2611553 | 17564.8 |
| abc-type multidrug transport system, atpase and permease component | SAMN02910353_02282 | Not Available | + | 2611526 - 2613271 | 64980.5 |
| uncharacterised nucleotidyltransferase | SAMN02910353_02283 | Not Available | + | 2613258 - 2614370 | 43218.2 |
| hypothetical protein | SAMN02910353_02284 | Not Available | + | 2614512 - 2615294 | 30245.4 |
| aaa domain-containing protein | SAMN02910353_02285 | Not Available | + | 2616133 - 2617194 | 39639.5 |
| mobilisation protein (mobc) | SAMN02910353_02286 | Not Available | + | 2617493 - 2617804 | 11848.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.