Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| Trna-his | Not Available | Not Available | + | 2566146 - 2566219 | Not Available |
| Trna-glu | Not Available | Not Available | + | 2566334 - 2566410 | Not Available |
| helix-turn-helix | SAMN02910353_02259 | Not Available | - | 2566579 - 2566803 | 8246.33 |
| site-specific recombinase xerd | SAMN02910353_02260 | Not Available | + | 2567264 - 2568214 | 36707.4 |
| atp-dependent dna helicase recg | SAMN02910353_02261 | Not Available | - | 2568571 - 2570049 | 55641.7 |
| hypothetical protein | SAMN02910353_02262 | Not Available | - | 2570216 - 2571067 | 31412.3 |
| leucine rich repeat-containing protein | SAMN02910353_02263 | Not Available | - | 2571080 - 2574229 | 117329.0 |
| hypothetical protein | SAMN02910353_02264 | Not Available | - | 2574232 - 2576385 | 82027.2 |
| hypothetical protein | SAMN02910353_02265 | Not Available | - | 2576401 - 2577036 | 23666.3 |
| radical sam additional 4fe4s-binding spasm domain-containing protein | SAMN02910353_02266 | Not Available | - | 2577066 - 2578157 | 40940.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.