Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02247 | Not Available | - | 2561393 - 2561545 | 5988.22 |
| hypothetical protein | SAMN02910353_02248 | Not Available | - | 2561542 - 2561664 | 4696.78 |
| l-ascorbate metabolism protein ulag, beta-lactamase superfamily | SAMN02910353_02249 | Not Available | - | 2561986 - 2562606 | 22688.0 |
| acetyltransferase (gnat) domain-containing protein | SAMN02910353_02250 | Not Available | + | 2562789 - 2563238 | 17075.3 |
| hypothetical protein | SAMN02910353_02251 | Not Available | - | 2563445 - 2564575 | 43804.7 |
| hypothetical protein | SAMN02910353_02252 | Not Available | - | 2564581 - 2565210 | 23571.0 |
| aaa domain-containing protein | SAMN02910353_02253 | Not Available | - | 2565207 - 2565719 | 19758.7 |
| Trna-ser | Not Available | Not Available | + | 2565879 - 2565973 | Not Available |
| Trna-glu | Not Available | Not Available | + | 2565976 - 2566052 | Not Available |
| Trna-tyr | Not Available | Not Available | + | 2566057 - 2566142 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.