Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nitrogen regulatory protein p-ii | SAMN02910353_02217 | Not Available | + | 2526030 - 2526368 | 12297.5 |
| kef-type k+ transport system, membrane component kefb | SAMN02910353_02218 | Not Available | - | 2526884 - 2528071 | 42811.1 |
| hypothetical protein | SAMN02910353_02219 | Not Available | + | 2528485 - 2529408 | 31892.8 |
| protein of unknown function | SAMN02910353_02220 | Not Available | + | 2529425 - 2531248 | 64188.0 |
| energy-coupling factor transport system permease protein | SAMN02910353_02221 | Not Available | + | 2531245 - 2532123 | 31940.6 |
| energy-coupling factor transport system atp-binding protein | SAMN02910353_02222 | Not Available | + | 2532096 - 2533739 | 59714.1 |
| energy-coupling factor transport system substrate-specific component | SAMN02910353_02223 | Not Available | + | 2533730 - 2534416 | 25046.5 |
| hypothetical protein | SAMN02910353_02224 | Not Available | + | 2534522 - 2534857 | 12752.6 |
| signal recognition particle subunit ffh/srp54 (srp54) | SAMN02910353_02225 | Not Available | + | 2534891 - 2536273 | 50609.1 |
| hypothetical protein | SAMN02910353_02226 | Not Available | + | 2536370 - 2536597 | 8244.59 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.