Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| trna uridine 5-carboxymethylaminomethyl modification enzyme | SAMN02910353_02207 | Not Available | + | 2515575 - 2517449 | 69401.8 |
| 16s rrna (guanine527-n7)-methyltransferase | SAMN02910353_02208 | Not Available | + | 2517454 - 2518161 | 26465.0 |
| chromosome partitioning protein, parb family | SAMN02910353_02209 | Not Available | + | 2518279 - 2519094 | 30758.3 |
| chromosome partitioning protein | SAMN02910353_02210 | Not Available | + | 2519332 - 2520162 | 30216.2 |
| chromosome partitioning protein, parb family | SAMN02910353_02211 | Not Available | + | 2520222 - 2521076 | 31658.3 |
| seryl-trna synthetase | SAMN02910353_02212 | Not Available | + | 2521088 - 2522380 | 49249.5 |
| protein of unknown function | SAMN02910353_02213 | Not Available | - | 2522547 - 2522696 | 5375.76 |
| hypothetical protein | SAMN02910353_02214 | Not Available | + | 2523067 - 2523492 | 15582.4 |
| flavorubredoxin | SAMN02910353_02215 | Not Available | + | 2523504 - 2524661 | 43061.0 |
| dna polymerase-3 subunit epsilon | SAMN02910353_02216 | Not Available | + | 2525164 - 2525751 | 21889.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.