Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| dna replication and repair protein recf | SAMN02910353_02197 | Not Available | - | 2505892 - 2507037 | 43148.0 |
| ribosome-associated protein | SAMN02910353_02198 | Not Available | - | 2507034 - 2507243 | 7367.16 |
| dna polymerase-3 subunit beta | SAMN02910353_02199 | Not Available | - | 2507333 - 2508436 | 40744.1 |
| chromosomal replication initiator protein | SAMN02910353_02200 | Not Available | - | 2508908 - 2510281 | 51331.2 |
| large subunit ribosomal protein l34 | SAMN02910353_02201 | Not Available | + | 2510884 - 2511018 | 5390.84 |
| ribonuclease p protein component | SAMN02910353_02202 | Not Available | + | 2511179 - 2511529 | 13461.7 |
| putative membrane protein insertion efficiency factor | SAMN02910353_02203 | Not Available | + | 2511526 - 2511834 | 11956.4 |
| yidc/oxa1 family membrane protein insertase | SAMN02910353_02204 | Not Available | + | 2511831 - 2512994 | 44408.8 |
| spoiiij-associated protein | SAMN02910353_02205 | Not Available | + | 2513035 - 2514090 | 38459.3 |
| trna modification gtpase | SAMN02910353_02206 | Not Available | + | 2514183 - 2515544 | 49183.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.