Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| mannan endo-1,4-beta-mannosidase | SAMN02910353_02187 | Not Available | - | 2493382 - 2495202 | 67793.0 |
| alpha-l-fucosidase 2 | SAMN02910353_02188 | Not Available | - | 2495218 - 2497536 | 85902.7 |
| hypothetical protein | SAMN02910353_02189 | Not Available | - | 2497850 - 2498662 | 30401.0 |
| hypothetical protein | SAMN02910353_02190 | Not Available | - | 2498659 - 2499135 | 17678.8 |
| dna gyrase subunit a | SAMN02910353_02191 | Not Available | - | 2499116 - 2501794 | 100019.0 |
| ycxb-like protein | SAMN02910353_02192 | Not Available | - | 2501977 - 2502534 | 21615.9 |
| dna gyrase subunit b | SAMN02910353_02193 | Not Available | - | 2502612 - 2504579 | 73780.6 |
| rep element-mobilizing transposase rayt | SAMN02910353_02194 | Not Available | - | 2504583 - 2505113 | 20654.7 |
| hypothetical protein | SAMN02910353_02195 | Not Available | - | 2505121 - 2505657 | 20970.9 |
| protein of unknown function | SAMN02910353_02196 | Not Available | - | 2505654 - 2505923 | 9901.01 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.