Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02165 | Not Available | + | 2471996 - 2472208 | 8216.74 |
| hypothetical protein | SAMN02910353_02166 | Not Available | - | 2472256 - 2476548 | 164592.0 |
| hypothetical protein | SAMN02910353_02167 | Not Available | - | 2476532 - 2477224 | 26675.5 |
| hypothetical protein | SAMN02910353_02168 | Not Available | - | 2477221 - 2478747 | 59352.5 |
| hypothetical protein | SAMN02910353_02169 | Not Available | - | 2478752 - 2479774 | 39613.5 |
| hypothetical protein | SAMN02910353_02170 | Not Available | + | 2480449 - 2481147 | 25160.4 |
| putative transcriptional regulator | SAMN02910353_02171 | Not Available | + | 2481161 - 2481394 | 8452.22 |
| protein of unknown function | SAMN02910353_02172 | Not Available | - | 2481498 - 2481875 | 13806.5 |
| uncharacterized membrane protein ycap, duf421 family | SAMN02910353_02173 | Not Available | - | 2481841 - 2482578 | 26852.0 |
| protein of unknown function | SAMN02910353_02174 | Not Available | + | 2482709 - 2482891 | 6684.75 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.