Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN02910353_02155 | Not Available | + | 2462074 - 2462508 | 16462.7 |
| two-component system, ompr family, alkaline phosphatase synthesis response regulator phop | SAMN02910353_02156 | Not Available | + | 2462529 - 2463206 | 24955.0 |
| two-component system, ompr family, phosphate regulon sensor histidine kinase phor | SAMN02910353_02157 | Not Available | + | 2463199 - 2464872 | 61956.0 |
| type iii pantothenate kinase | SAMN02910353_02158 | Not Available | + | 2464974 - 2465747 | 27491.7 |
| macrophage migration inhibitory factor (mif) | SAMN02910353_02159 | Not Available | + | 2465760 - 2466101 | 12224.4 |
| aryl-phospho-beta-d-glucosidase bglc, gh1 family | SAMN02910353_02160 | Not Available | + | 2466281 - 2468338 | 74665.3 |
| site-specific dna recombinase | SAMN02910353_02161 | Not Available | - | 2468522 - 2470153 | 61984.8 |
| transposon-encoded protein tnpw | SAMN02910353_02162 | Not Available | - | 2470243 - 2470431 | 6944.23 |
| hypothetical protein | SAMN02910353_02163 | Not Available | - | 2470718 - 2470936 | 8363.18 |
| mobilisation protein (mobc) | SAMN02910353_02164 | Not Available | + | 2471461 - 2471805 | 13127.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.