Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| phosphate starvation-inducible protein phoh | SAMN02910353_00130 | Not Available | - | 140189 - 141157 | 35586.1 |
| cyth domain-containing protein | SAMN02910353_00131 | Not Available | - | 141157 - 141672 | 19954.5 |
| hypothetical protein | SAMN02910353_00132 | Not Available | - | 141867 - 142613 | 27670.1 |
| glyceraldehyde 3-phosphate dehydrogenase | SAMN02910353_00133 | Not Available | + | 142835 - 143872 | 36649.8 |
| zinc-ribbon domain-containing protein | SAMN02910353_00134 | Not Available | - | 143964 - 144341 | 13711.6 |
| zinc-ribbon domain-containing protein | SAMN02910353_00135 | Not Available | - | 144389 - 144745 | 12345.6 |
| small, acid-soluble spore protein, alpha/beta type | SAMN02910353_00136 | Not Available | + | 145175 - 145375 | 7332.67 |
| hypothetical protein | SAMN02910353_00137 | Not Available | + | 145487 - 145813 | 11818.4 |
| exodeoxyribonuclease v alpha subunit | SAMN02910353_00138 | Not Available | + | 145880 - 148075 | 81889.0 |
| rod shape-determining protein mreb | SAMN02910353_00139 | Not Available | + | 148093 - 149112 | 36526.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.