Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02115 | Not Available | - | 2414656 - 2415042 | 14740.7 |
| translation initiation factor if-2 | SAMN02910353_02116 | Not Available | - | 2415190 - 2417850 | 97195.9 |
| ribosomal protein l7ae | SAMN02910353_02117 | Not Available | - | 2417912 - 2418226 | 11361.9 |
| hypothetical protein | SAMN02910353_02118 | Not Available | - | 2418195 - 2418473 | 10610.1 |
| nusa antitermination factor | SAMN02910353_02119 | Not Available | - | 2418463 - 2419638 | 43303.6 |
| ribosome maturation factor rimp | SAMN02910353_02120 | Not Available | - | 2419694 - 2420170 | 18138.5 |
| hypothetical protein | SAMN02910353_02121 | Not Available | - | 2420412 - 2420996 | 20466.4 |
| multiple sugar transport system substrate-binding protein | SAMN02910353_02122 | Not Available | - | 2421206 - 2422609 | 51416.8 |
| 4fe-4s dicluster domain-containing protein | SAMN02910353_02123 | Not Available | + | 2422878 - 2423048 | 5390.3 |
| protein of unknown function | SAMN02910353_02124 | Not Available | - | 2423115 - 2423714 | 21502.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.