Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glycosyl hydrolase family 26 | SAMN02910353_02105 | Not Available | - | 2403340 - 2405427 | 76550.5 |
| hypothetical protein | SAMN02910353_02106 | Not Available | - | 2405785 - 2406069 | 10745.9 |
| protein of unknown function | SAMN02910353_02107 | Not Available | - | 2406171 - 2407718 | 56401.6 |
| abc-type uncharacterized transport system | SAMN02910353_02108 | Not Available | - | 2407715 - 2409331 | 58833.6 |
| abc-2 type transport system permease protein | SAMN02910353_02109 | Not Available | - | 2409357 - 2410061 | 26241.8 |
| abc-2 type transport system atp-binding protein | SAMN02910353_02110 | Not Available | - | 2410061 - 2411197 | 42044.9 |
| riboflavin kinase / fmn adenylyltransferase | SAMN02910353_02111 | Not Available | - | 2411386 - 2412273 | 31856.9 |
| trna pseudouridine55 synthase | SAMN02910353_02112 | Not Available | - | 2412277 - 2413170 | 32512.2 |
| phosphoesterase recj domain-containing protein | SAMN02910353_02113 | Not Available | - | 2413170 - 2414120 | 34968.2 |
| ribosome-binding factor a | SAMN02910353_02114 | Not Available | - | 2414305 - 2414643 | 12816.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.