Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transketolase | SAMN02910353_02085 | Not Available | - | 2382334 - 2383284 | 33204.2 |
| transketolase | SAMN02910353_02086 | Not Available | - | 2383289 - 2384128 | 30075.8 |
| hypothetical protein | SAMN02910353_02087 | Not Available | - | 2384160 - 2384948 | 28807.4 |
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN02910353_02088 | Not Available | - | 2384992 - 2385906 | 33160.8 |
| signal peptidase ii | SAMN02910353_02089 | Not Available | - | 2385899 - 2386420 | 19500.3 |
| isoleucyl-trna synthetase | SAMN02910353_02090 | Not Available | - | 2386481 - 2389252 | 103922.0 |
| cell division initiation protein | SAMN02910353_02091 | Not Available | - | 2389314 - 2389859 | 20626.0 |
| rna-binding protein ylmh, contains s4-like domain | SAMN02910353_02092 | Not Available | - | 2389872 - 2390630 | 28221.0 |
| cell division inhibitor sepf | SAMN02910353_02093 | Not Available | - | 2390630 - 2391115 | 17378.5 |
| hypothetical protein | SAMN02910353_02094 | Not Available | - | 2391246 - 2391941 | 25236.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.