Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| guanylate kinase | SAMN02910353_02065 | Not Available | - | 2353650 - 2354258 | 22765.0 |
| hypothetical protein | SAMN02910353_02066 | Not Available | - | 2354248 - 2354505 | 9189.1 |
| tigr00255 family protein | SAMN02910353_02067 | Not Available | - | 2354509 - 2355459 | 36229.3 |
| uncharacterized protein tigr03905 | SAMN02910353_02068 | Not Available | - | 2355682 - 2355936 | 9167.13 |
| dna-directed rna polymerase subunit beta' | SAMN02910353_02069 | Not Available | - | 2355995 - 2359717 | 138671.0 |
| dna-directed rna polymerase subunit beta | SAMN02910353_02070 | Not Available | - | 2359770 - 2363675 | 146310.0 |
| hypothetical protein | SAMN02910353_02071 | Not Available | - | 2363980 - 2364261 | 9722.41 |
| rod shape determining protein roda | SAMN02910353_02072 | Not Available | - | 2364266 - 2365426 | 42654.9 |
| magnesium chelatase family protein | SAMN02910353_02073 | Not Available | - | 2365585 - 2367111 | 55531.2 |
| hypothetical protein | SAMN02910353_02074 | Not Available | - | 2367123 - 2367881 | 27743.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.