Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosome biogenesis gtpase | SAMN02910353_02055 | Not Available | - | 2342381 - 2343259 | 31857.2 |
| serine/threonine protein kinase | SAMN02910353_02056 | Not Available | - | 2343253 - 2345715 | 90207.8 |
| protein phosphatase | SAMN02910353_02057 | Not Available | - | 2345783 - 2346508 | 26578.4 |
| 23s rrna (adenine2503-c2)-methyltransferase | SAMN02910353_02058 | Not Available | - | 2346505 - 2347563 | 39494.4 |
| 16s rrna (cytosine967-c5)-methyltransferase | SAMN02910353_02059 | Not Available | - | 2347599 - 2348888 | 47675.3 |
| hypothetical protein | SAMN02910353_02060 | Not Available | - | 2348885 - 2349589 | 25971.1 |
| methionyl-trna formyltransferase | SAMN02910353_02061 | Not Available | - | 2349603 - 2350532 | 33843.1 |
| peptide deformylase | SAMN02910353_02062 | Not Available | - | 2350534 - 2350995 | 17510.7 |
| replication restart dna helicase pria | SAMN02910353_02063 | Not Available | - | 2351013 - 2353457 | 90810.1 |
| dna-directed rna polymerase subunit omega | SAMN02910353_02064 | Not Available | - | 2353457 - 2353657 | 7341.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.