Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| stage v sporulation protein ac | SAMN02910353_02035 | Not Available | + | 2318344 - 2318784 | 15170.5 |
| 4'-phosphopantetheinyl transferase | SAMN02910353_02036 | Not Available | - | 2318774 - 2319301 | 19900.1 |
| hypothetical protein | SAMN02910353_02037 | Not Available | + | 2319440 - 2319826 | 14514.2 |
| hypothetical protein | SAMN02910353_02038 | Not Available | + | 2319841 - 2320134 | 11099.5 |
| hypothetical protein | SAMN02910353_02039 | Not Available | + | 2320323 - 2320442 | 4383.35 |
| putative transcriptional regulator | SAMN02910353_02040 | Not Available | + | 2320432 - 2320683 | 9540.46 |
| hypothetical protein | SAMN02910353_02041 | Not Available | + | 2320738 - 2321169 | 15848.2 |
| pyruvate-ferredoxin/flavodoxin oxidoreductase | SAMN02910353_02042 | Not Available | - | 2321256 - 2324801 | 128520.0 |
| molecular chaperone htpg | SAMN02910353_02043 | Not Available | - | 2325572 - 2327476 | 73208.2 |
| d-3-phosphoglycerate dehydrogenase | SAMN02910353_02044 | Not Available | - | 2327929 - 2329095 | 41026.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.