Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02025 | Not Available | + | 2306513 - 2306800 | 10685.7 |
| hypothetical protein | SAMN02910353_02026 | Not Available | + | 2306844 - 2307695 | 31287.9 |
| anti-sigma b factor antagonist | SAMN02910353_02027 | Not Available | + | 2307699 - 2307995 | 11006.1 |
| hypothetical protein | SAMN02910353_02028 | Not Available | + | 2308011 - 2308433 | 15224.2 |
| nhlm bacteriocin system abc transporter, peptidase/atp-binding protein | SAMN02910353_02029 | Not Available | + | 2308445 - 2310628 | 80123.9 |
| nhlm bacteriocin system abc transporter, atp-binding protein | SAMN02910353_02030 | Not Available | + | 2310645 - 2312828 | 79802.7 |
| glutamine synthetase | SAMN02910353_02031 | Not Available | + | 2313087 - 2314379 | 47942.3 |
| response regulator receiver and antar domain protein | SAMN02910353_02032 | Not Available | + | 2314392 - 2314961 | 20944.1 |
| glcnac-pi de-n-acetylase | SAMN02910353_02033 | Not Available | + | 2315056 - 2315760 | 25918.5 |
| uncharacterized membrane protein yfho | SAMN02910353_02034 | Not Available | + | 2315757 - 2318312 | 94636.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.