Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_02003 | Not Available | - | 2281204 - 2281950 | 28025.0 |
| leucine rich repeat-containing protein | SAMN02910353_02004 | Not Available | - | 2281966 - 2282676 | 25757.9 |
| gtp-binding protein | SAMN02910353_02005 | Not Available | - | 2283010 - 2284833 | 67605.2 |
| hypothetical protein | SAMN02910353_02006 | Not Available | - | 2284890 - 2285525 | 23486.9 |
| Trna-tyr | Not Available | Not Available | + | 2285678 - 2285763 | Not Available |
| Trna-thr | Not Available | Not Available | + | 2285808 - 2285883 | Not Available |
| hypothetical protein | SAMN02910353_02009 | Not Available | - | 2285905 - 2286094 | 6694.93 |
| Trna-pro | Not Available | Not Available | + | 2286522 - 2286598 | Not Available |
| hypothetical protein | SAMN02910353_02011 | Not Available | - | 2286719 - 2287099 | 13445.1 |
| 16s rrna (uracil1498-n3)-methyltransferase | SAMN02910353_02012 | Not Available | - | 2287232 - 2287954 | 26562.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.