Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 23s rrna pseudouridine1911/1915/1917 synthase | SAMN02910353_01973 | Not Available | - | 2254308 - 2255132 | 30116.9 |
| hypothetical protein | SAMN02910353_01974 | Not Available | - | 2255176 - 2255973 | 28361.4 |
| alpha-ribazole phosphatase | SAMN02910353_01975 | Not Available | - | 2256356 - 2257000 | 23753.2 |
| transcriptional regulator, contains xre-family hth domain | SAMN02910353_01976 | Not Available | + | 2257231 - 2257962 | 27328.4 |
| hypothetical protein | SAMN02910353_01977 | Not Available | - | 2257998 - 2258438 | 15882.0 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit gamma | SAMN02910353_01978 | Not Available | - | 2258673 - 2259206 | 19076.4 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit beta | SAMN02910353_01979 | Not Available | - | 2259206 - 2259976 | 27457.0 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit alpha | SAMN02910353_01980 | Not Available | - | 2259976 - 2261034 | 38116.1 |
| 2-oxoglutarate ferredoxin oxidoreductase subunit delta | SAMN02910353_01981 | Not Available | - | 2261065 - 2261271 | 7406.3 |
| cobq/cobb/mind/para nucleotide binding domain-containing protein | SAMN02910353_01982 | Not Available | - | 2261559 - 2262221 | 24079.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.