Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| large subunit ribosomal protein l16 | SAMN02910353_01963 | Not Available | - | 2245776 - 2246201 | 16145.9 |
| small subunit ribosomal protein s3 | SAMN02910353_01964 | Not Available | - | 2246201 - 2246989 | 29759.8 |
| large subunit ribosomal protein l22 | SAMN02910353_01965 | Not Available | - | 2247008 - 2247346 | 12505.6 |
| small subunit ribosomal protein s19 | SAMN02910353_01966 | Not Available | - | 2247364 - 2247648 | 10486.7 |
| large subunit ribosomal protein l2 | SAMN02910353_01967 | Not Available | - | 2247671 - 2248504 | 30668.2 |
| large subunit ribosomal protein l23 | SAMN02910353_01968 | Not Available | - | 2248583 - 2248876 | 10810.3 |
| large subunit ribosomal protein l4 | SAMN02910353_01969 | Not Available | - | 2248876 - 2249499 | 22543.3 |
| large subunit ribosomal protein l3 | SAMN02910353_01970 | Not Available | - | 2249517 - 2250149 | 22222.1 |
| small subunit ribosomal protein s10 | SAMN02910353_01971 | Not Available | - | 2250258 - 2250572 | 11642.3 |
| murein dd-endopeptidase mepm and murein hydrolase activator nlpd, contain lysm domain | SAMN02910353_01972 | Not Available | - | 2251473 - 2253203 | 63643.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.