Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s5 | SAMN02910353_01953 | Not Available | - | 2241896 - 2242396 | 17161.2 |
| large subunit ribosomal protein l18 | SAMN02910353_01954 | Not Available | - | 2242412 - 2242771 | 13032.6 |
| large subunit ribosomal protein l6 | SAMN02910353_01955 | Not Available | - | 2242791 - 2243336 | 19780.9 |
| small subunit ribosomal protein s8 | SAMN02910353_01956 | Not Available | - | 2243349 - 2243747 | 14338.6 |
| small subunit ribosomal protein s14 | SAMN02910353_01957 | Not Available | - | 2243772 - 2243957 | 7126.88 |
| large subunit ribosomal protein l5 | SAMN02910353_01958 | Not Available | - | 2243974 - 2244513 | 19993.5 |
| large subunit ribosomal protein l24 | SAMN02910353_01959 | Not Available | - | 2244529 - 2244870 | 12318.2 |
| lsu ribosomal protein l14p | SAMN02910353_01960 | Not Available | - | 2244889 - 2245257 | 13432.6 |
| small subunit ribosomal protein s17 | SAMN02910353_01961 | Not Available | - | 2245299 - 2245559 | 10085.5 |
| large subunit ribosomal protein l29 | SAMN02910353_01962 | Not Available | - | 2245579 - 2245776 | 7424.99 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.