Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-phosphoshikimate 1-carboxyvinyltransferase | SAMN02910353_00110 | Not Available | - | 119418 - 120644 | 44120.8 |
| 3-dehydroquinate synthase | SAMN02910353_00111 | Not Available | - | 120646 - 121689 | 37879.8 |
| nudix domain-containing protein | SAMN02910353_00112 | Not Available | + | 122021 - 122536 | 20035.6 |
| site-specific recombinase xerd | SAMN02910353_00113 | Not Available | + | 122533 - 123519 | 37468.7 |
| protein of unknown function | SAMN02910353_00114 | Not Available | + | 123618 - 123920 | 11751.2 |
| hypothetical protein | SAMN02910353_00115 | Not Available | - | 123958 - 125199 | 46789.5 |
| putative efflux protein, mate family | SAMN02910353_00116 | Not Available | + | 125400 - 126767 | 48543.8 |
| aquaporin z | SAMN02910353_00117 | Not Available | + | 127070 - 127867 | 27229.6 |
| gntr family transcriptional regulator | SAMN02910353_00118 | Not Available | + | 128169 - 128549 | 14175.1 |
| abc-2 type transport system atp-binding protein | SAMN02910353_00119 | Not Available | + | 128546 - 129424 | 33348.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.