Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| small subunit ribosomal protein s4 | SAMN02910353_01943 | Not Available | - | 2236410 - 2237009 | 22915.9 |
| small subunit ribosomal protein s11 | SAMN02910353_01944 | Not Available | - | 2237031 - 2237435 | 14534.6 |
| small subunit ribosomal protein s13 | SAMN02910353_01945 | Not Available | - | 2237450 - 2237818 | 13673.7 |
| translation initiation factor if-1 | SAMN02910353_01946 | Not Available | - | 2238006 - 2238224 | 8184.05 |
| hypothetical protein | SAMN02910353_01947 | Not Available | - | 2238238 - 2238477 | 8615.51 |
| methionyl aminopeptidase | SAMN02910353_01948 | Not Available | - | 2238492 - 2239244 | 26914.3 |
| adenylate kinase | SAMN02910353_01949 | Not Available | - | 2239244 - 2239879 | 22681.2 |
| protein translocase subunit secy/sec61 alpha | SAMN02910353_01950 | Not Available | - | 2239904 - 2241244 | 49417.3 |
| large subunit ribosomal protein l15 | SAMN02910353_01951 | Not Available | - | 2241246 - 2241686 | 15332.6 |
| large subunit ribosomal protein l30 | SAMN02910353_01952 | Not Available | - | 2241706 - 2241882 | 6299.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.