Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01923 | Not Available | - | 2216602 - 2217072 | 18210.4 |
| peptidoglycan-binding domain-containing protein, expansin | SAMN02910353_01924 | Not Available | - | 2217088 - 2217957 | 31901.4 |
| phosphoribosylformylglycinamidine cyclo-ligase | SAMN02910353_01925 | Not Available | - | 2218357 - 2219394 | 36772.7 |
| amidophosphoribosyltransferase | SAMN02910353_01926 | Not Available | - | 2219577 - 2221001 | 52916.4 |
| phosphoribosylaminoimidazole-succinocarboxamide synthase | SAMN02910353_01927 | Not Available | - | 2221005 - 2221724 | 27203.7 |
| hypothetical protein | SAMN02910353_01928 | Not Available | - | 2221967 - 2222191 | 8166.79 |
| phosphoglycolate phosphatase | SAMN02910353_01929 | Not Available | - | 2222196 - 2222849 | 23753.3 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | SAMN02910353_01930 | Not Available | - | 2222849 - 2223349 | 16950.9 |
| hypothetical protein | SAMN02910353_01931 | Not Available | - | 2223353 - 2224447 | 40292.8 |
| glycosyltransferase involved in cell wall bisynthesis | SAMN02910353_01932 | Not Available | - | 2224471 - 2225442 | 36946.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.