Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| terminase small subunit | SAMN02910353_01913 | Not Available | - | 2205199 - 2205681 | 17989.4 |
| leucine rich repeat-containing protein | SAMN02910353_01914 | Not Available | - | 2206119 - 2208689 | 90345.5 |
| hypothetical protein | SAMN02910353_01915 | Not Available | + | 2209015 - 2210043 | 37585.3 |
| phosphoribosylamine--glycine ligase | SAMN02910353_01916 | Not Available | + | 2210062 - 2211348 | 46202.9 |
| hypothetical protein | SAMN02910353_01917 | Not Available | + | 2211359 - 2212075 | 26920.0 |
| phosphoribosylaminoimidazolecarboxamide formyltransferase / imp cyclohydrolase | SAMN02910353_01918 | Not Available | - | 2212316 - 2213497 | 43823.2 |
| yd repeat-containing protein | SAMN02910353_01919 | Not Available | - | 2213527 - 2214435 | 34843.4 |
| imp cyclohydrolase-like protein | SAMN02910353_01920 | Not Available | - | 2214435 - 2215148 | 26655.4 |
| uncharacterized membrane protein | SAMN02910353_01921 | Not Available | - | 2215373 - 2215966 | 22620.2 |
| phosphoribosylglycinamide formyltransferase-1 | SAMN02910353_01922 | Not Available | - | 2215963 - 2216586 | 22481.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.