Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| chaperonin groes | SAMN02910353_01903 | Not Available | - | 2197259 - 2197531 | 9804.08 |
| ferrous iron transport protein a | SAMN02910353_01904 | Not Available | - | 2197891 - 2198187 | 10383.6 |
| hypothetical protein | SAMN02910353_01905 | Not Available | - | 2198350 - 2199270 | 35074.0 |
| hypothetical protein | SAMN02910353_01906 | Not Available | - | 2199267 - 2199653 | 13482.1 |
| hypothetical protein | SAMN02910353_01907 | Not Available | - | 2199650 - 2200054 | 14899.1 |
| hypothetical protein | SAMN02910353_01908 | Not Available | - | 2200056 - 2200421 | 13493.1 |
| hypothetical protein | SAMN02910353_01909 | Not Available | - | 2200432 - 2201259 | 30387.7 |
| hypothetical protein | SAMN02910353_01910 | Not Available | - | 2201553 - 2202512 | 34300.2 |
| hypothetical protein | SAMN02910353_01911 | Not Available | - | 2202527 - 2203663 | 41957.3 |
| phage terminase, large subunit, pbsx family | SAMN02910353_01912 | Not Available | - | 2203949 - 2205202 | 47636.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.