Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01883 | Not Available | + | 2173163 - 2173459 | 10849.2 |
| sortase b | SAMN02910353_01884 | Not Available | + | 2173453 - 2174157 | 26962.0 |
| pilin isopeptide linkage domain-containing protein | SAMN02910353_01885 | Not Available | + | 2174178 - 2174918 | 26848.4 |
| hypothetical protein | SAMN02910353_01886 | Not Available | + | 2174911 - 2175828 | 33035.3 |
| hypothetical protein | SAMN02910353_01887 | Not Available | + | 2175767 - 2177818 | 75823.0 |
| hypothetical protein | SAMN02910353_01888 | Not Available | - | 2177985 - 2179640 | 59663.5 |
| uncharacterized conserved protein ylou, alkaline shock protein (asp23) family | SAMN02910353_01889 | Not Available | - | 2179662 - 2180018 | 12737.5 |
| multiple sugar transport system permease protein | SAMN02910353_01890 | Not Available | - | 2180276 - 2181307 | 39156.8 |
| abc-type sugar transport system, permease component | SAMN02910353_01891 | Not Available | - | 2181321 - 2182292 | 36262.4 |
| hypothetical protein | SAMN02910353_01892 | Not Available | - | 2182294 - 2185125 | 103489.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.