Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| excinuclease abc subunit c | SAMN02910353_01873 | Not Available | - | 2163673 - 2165496 | 69383.2 |
| hypothetical protein | SAMN02910353_01874 | Not Available | - | 2166171 - 2166782 | 22626.0 |
| hypothetical protein | SAMN02910353_01875 | Not Available | - | 2166779 - 2167732 | 34331.1 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | SAMN02910353_01876 | Not Available | + | 2168011 - 2168565 | 19994.1 |
| phosphopantetheine adenylyltransferase | SAMN02910353_01877 | Not Available | + | 2168562 - 2169053 | 18072.0 |
| hypothetical protein | SAMN02910353_01878 | Not Available | + | 2169060 - 2169590 | 19639.7 |
| hypothetical protein | SAMN02910353_01879 | Not Available | + | 2169717 - 2169944 | 8163.11 |
| dipicolinate synthase subunit b | SAMN02910353_01880 | Not Available | - | 2169994 - 2170644 | 23250.1 |
| dipicolinate synthase subunit a | SAMN02910353_01881 | Not Available | - | 2170634 - 2171503 | 29800.0 |
| protein of unknown function | SAMN02910353_01882 | Not Available | + | 2171730 - 2172671 | 35258.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.