Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01843 | Not Available | + | 2128179 - 2129924 | 62680.2 |
| macb-like periplasmic core domain | SAMN02910353_01844 | Not Available | + | 2129937 - 2131058 | 41636.6 |
| abc-type glycerol-3-phosphate transport system, substrate-binding protein | SAMN02910353_01845 | Not Available | + | 2131092 - 2133518 | 90675.3 |
| hypothetical protein | SAMN02910353_01846 | Not Available | - | 2133814 - 2134317 | 18110.7 |
| stage iv sporulation protein b | SAMN02910353_01847 | Not Available | + | 2134439 - 2135644 | 41771.0 |
| phosphocarrier protein | SAMN02910353_01848 | Not Available | - | 2135707 - 2135979 | 9931.98 |
| trna (guanine37-n1)-methyltransferase | SAMN02910353_01849 | Not Available | - | 2136653 - 2137348 | 26364.7 |
| 16s rrna processing protein rimm | SAMN02910353_01850 | Not Available | - | 2137359 - 2137862 | 18696.6 |
| hypothetical protein | SAMN02910353_01851 | Not Available | - | 2137864 - 2138691 | 31308.2 |
| adenylosuccinate lyase | SAMN02910353_01852 | Not Available | - | 2138888 - 2140327 | 54361.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.