Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| transglutaminase-like superfamily protein | SAMN02910353_01793 | Not Available | - | 2075470 - 2078181 | 102004.0 |
| protein of unknown function duf58 | SAMN02910353_01794 | Not Available | - | 2078193 - 2079392 | 45383.8 |
| moxr-like atpase | SAMN02910353_01795 | Not Available | - | 2079396 - 2080355 | 35104.6 |
| leucine rich repeat-containing protein | SAMN02910353_01796 | Not Available | + | 2080522 - 2081727 | 41781.1 |
| putative pyruvate formate lyase activating enzyme | SAMN02910353_01797 | Not Available | + | 2081708 - 2082616 | 33470.7 |
| glycosidase | SAMN02910353_01798 | Not Available | - | 2082653 - 2084251 | 61432.1 |
| hd domain-containing protein | SAMN02910353_01799 | Not Available | - | 2084327 - 2084929 | 22948.1 |
| acetyltransferase (gnat) family protein | SAMN02910353_01800 | Not Available | - | 2085142 - 2085888 | 28341.8 |
| putative endonuclease | SAMN02910353_01801 | Not Available | - | 2085893 - 2086222 | 12031.3 |
| uncharacterized protein | SAMN02910353_01802 | Not Available | - | 2086222 - 2088498 | 83872.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.