Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine rich repeat-containing protein | SAMN02910353_01753 | Not Available | - | 2029142 - 2032402 | 119590.0 |
| putative efflux protein, mate family | SAMN02910353_01754 | Not Available | + | 2032727 - 2034094 | 49993.4 |
| atp-binding cassette, subfamily b | SAMN02910353_01755 | Not Available | + | 2034218 - 2036074 | 69239.7 |
| putative adhesin | SAMN02910353_01756 | Not Available | - | 2036158 - 2037096 | 33299.0 |
| putative zinc-finger | SAMN02910353_01757 | Not Available | - | 2037096 - 2038088 | 36118.2 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910353_01758 | Not Available | - | 2038078 - 2038572 | 19522.2 |
| hypothetical protein | SAMN02910353_01759 | Not Available | - | 2038830 - 2039066 | 8581.14 |
| hypothetical protein | SAMN02910353_01760 | Not Available | + | 2039364 - 2039885 | 20065.8 |
| hypothetical protein | SAMN02910353_01761 | Not Available | + | 2040341 - 2040472 | 4693.6 |
| hypothetical protein | SAMN02910353_01762 | Not Available | + | 2040474 - 2040659 | 7445.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.