Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01743 | Not Available | + | 2016721 - 2018244 | 57615.0 |
| methylenetetrahydrofolate dehydrogenase (nadp+) / methenyltetrahydrofolate cyclohydrolase | SAMN02910353_01744 | Not Available | - | 2018293 - 2019150 | 30403.1 |
| phosphatidylglycerol:prolipoprotein diacylglycerol transferase | SAMN02910353_01745 | Not Available | - | 2019166 - 2020728 | 57419.5 |
| predicted zn-dependent peptidase | SAMN02910353_01746 | Not Available | - | 2020725 - 2022011 | 48031.3 |
| predicted zn-dependent peptidase | SAMN02910353_01747 | Not Available | - | 2022011 - 2023276 | 46952.4 |
| arac-type dna-binding protein | SAMN02910353_01748 | Not Available | - | 2023480 - 2024349 | 33410.1 |
| alginate o-acetyltransferase complex protein algi | SAMN02910353_01749 | Not Available | + | 2024825 - 2026219 | 54505.8 |
| gdsl-like lipase/acylhydrolase family protein | SAMN02910353_01750 | Not Available | + | 2026236 - 2027126 | 32813.1 |
| hypothetical protein | SAMN02910353_01751 | Not Available | + | 2027174 - 2027719 | 20987.1 |
| reverse transcriptase (rna-dependent dna polymerase) | SAMN02910353_01752 | Not Available | + | 2027885 - 2029090 | 46629.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.