Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01723 | Not Available | - | 1996343 - 1996714 | 13285.7 |
| hypothetical protein | SAMN02910353_01724 | Not Available | - | 1996714 - 1996968 | 8924.82 |
| hypothetical protein | SAMN02910353_01725 | Not Available | + | 1997068 - 1997553 | 17674.0 |
| hypothetical protein | SAMN02910353_01726 | Not Available | + | 1997636 - 1998247 | 22719.6 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910353_01727 | Not Available | + | 1998342 - 1998839 | 19191.1 |
| putative zinc-finger | SAMN02910353_01728 | Not Available | + | 1998836 - 1999642 | 30115.1 |
| transglutaminase-like superfamily protein | SAMN02910353_01729 | Not Available | - | 1999675 - 2000604 | 35393.8 |
| fur family transcriptional regulator, ferric uptake regulator | SAMN02910353_01730 | Not Available | + | 2000816 - 2001250 | 16445.7 |
| hypothetical protein | SAMN02910353_01731 | Not Available | + | 2001404 - 2001892 | 17655.2 |
| hypothetical protein | SAMN02910353_01732 | Not Available | + | 2001985 - 2002659 | 25067.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.