Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| uncharacterized protein family (upf0051) | SAMN02910353_01703 | Not Available | + | 1974785 - 1975708 | 33185.1 |
| abc-type glycerol-3-phosphate transport system, substrate-binding protein | SAMN02910353_01704 | Not Available | + | 1975987 - 1977543 | 58856.1 |
| 6-pyruvoyltetrahydropterin/6- carboxytetrahydropterin synthase | SAMN02910353_01705 | Not Available | + | 1977760 - 1978185 | 15782.7 |
| 7-carboxy-7-deazaguanine synthase | SAMN02910353_01706 | Not Available | + | 1978185 - 1978844 | 24520.4 |
| gtp cyclohydrolase i | SAMN02910353_01707 | Not Available | + | 1978846 - 1979406 | 20861.0 |
| 7-cyano-7-deazaguanine synthase | SAMN02910353_01708 | Not Available | + | 1979581 - 1980258 | 24088.4 |
| 7-cyano-7-deazaguanine reductase | SAMN02910353_01709 | Not Available | + | 1980346 - 1980843 | 19237.8 |
| lysophospholipase l1 | SAMN02910353_01710 | Not Available | - | 1981196 - 1984828 | 130670.0 |
| dna repair protein radc | SAMN02910353_01711 | Not Available | + | 1985375 - 1986070 | 25203.2 |
| dna repair protein radc | SAMN02910353_01712 | Not Available | + | 1986067 - 1986768 | 25278.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.