Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | SAMN02910353_01693 | Not Available | - | 1960110 - 1960466 | 12944.4 |
| hypothetical protein | SAMN02910353_01694 | Not Available | + | 1960700 - 1960888 | 7239.03 |
| peptide chain release factor 1 | SAMN02910353_01695 | Not Available | + | 1960926 - 1961999 | 40548.9 |
| l-threonylcarbamoyladenylate synthase | SAMN02910353_01696 | Not Available | + | 1961947 - 1963017 | 38663.5 |
| dephospho-coa kinase | SAMN02910353_01697 | Not Available | + | 1963014 - 1963664 | 23833.3 |
| aspartyl aminopeptidase | SAMN02910353_01698 | Not Available | + | 1963680 - 1965083 | 51077.0 |
| phosphoserine phosphatase | SAMN02910353_01699 | Not Available | - | 1965424 - 1966020 | 23867.0 |
| right handed beta helix region | SAMN02910353_01700 | Not Available | + | 1966425 - 1969295 | 103618.0 |
| beta-galactosidase | SAMN02910353_01701 | Not Available | + | 1969317 - 1973603 | 157404.0 |
| fe-s cluster assembly atp-binding protein | SAMN02910353_01702 | Not Available | + | 1974043 - 1974771 | 26526.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.