Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribosomal protein s18 acetylase rimi | SAMN02910353_00080 | Not Available | - | 91120 - 91575 | 17851.1 |
| putative protease | SAMN02910353_00081 | Not Available | - | 91575 - 92792 | 46092.1 |
| upf0755 protein | SAMN02910353_00082 | Not Available | - | 92802 - 94172 | 52012.0 |
| 5-formyltetrahydrofolate cyclo-ligase | SAMN02910353_00083 | Not Available | - | 94165 - 94722 | 20491.6 |
| 4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis | SAMN02910353_00084 | Not Available | - | 94722 - 95267 | 19004.2 |
| hypothetical protein | SAMN02910353_00085 | Not Available | - | 95329 - 96216 | 34184.5 |
| thymidylate synthase (fad) | SAMN02910353_00086 | Not Available | - | 96217 - 96996 | 28805.5 |
| metal-dependent hydrolase, beta-lactamase superfamily ii | SAMN02910353_00087 | Not Available | - | 97150 - 98013 | 31392.3 |
| uncharacterized lipoprotein yddw, upf0748 family | SAMN02910353_00088 | Not Available | + | 98077 - 99219 | 43275.3 |
| cellulose binding domain-containing protein | SAMN02910353_00089 | Not Available | - | 99353 - 101776 | 87737.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.