Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor g | SAMN02910353_01643 | Not Available | + | 1893278 - 1895359 | 74806.7 |
| putative zinc-finger | SAMN02910353_01644 | Not Available | - | 1895495 - 1896325 | 31347.9 |
| rna polymerase sigma-70 factor, ecf subfamily | SAMN02910353_01645 | Not Available | - | 1896331 - 1896813 | 18272.7 |
| hypothetical protein | SAMN02910353_01646 | Not Available | + | 1896901 - 1898052 | 43425.1 |
| homoserine dehydrogenase | SAMN02910353_01647 | Not Available | - | 1898093 - 1899286 | 42880.3 |
| chorismate mutase | SAMN02910353_01648 | Not Available | - | 1899306 - 1899749 | 16053.5 |
| arac family transcriptional regulator | SAMN02910353_01649 | Not Available | + | 1900048 - 1900881 | 31274.4 |
| gtpase, g3e family | SAMN02910353_01650 | Not Available | + | 1901313 - 1902434 | 41714.3 |
| tigr03943 family protein | SAMN02910353_01651 | Not Available | + | 1902444 - 1903406 | 36935.0 |
| pyrroline-5-carboxylate reductase | SAMN02910353_01652 | Not Available | + | 1903570 - 1904376 | 28019.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.