Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| cdp-diglyceride synthetase | SAMN02910353_01623 | Not Available | - | 1872893 - 1873477 | 21126.3 |
| diacylglycerol kinase (atp) | SAMN02910353_01624 | Not Available | - | 1873477 - 1873896 | 15480.0 |
| hypothetical protein | SAMN02910353_01625 | Not Available | - | 1874336 - 1874848 | 20054.0 |
| hypothetical protein | SAMN02910353_01626 | Not Available | - | 1875116 - 1875697 | 23356.0 |
| hypothetical protein | SAMN02910353_01627 | Not Available | - | 1875740 - 1876321 | 23187.3 |
| hypothetical protein | SAMN02910353_01628 | Not Available | - | 1876968 - 1877600 | 24302.2 |
| hypothetical protein | SAMN02910353_01629 | Not Available | - | 1877660 - 1877896 | 9276.2 |
| protein of unknown function | SAMN02910353_01630 | Not Available | + | 1878564 - 1878848 | 10930.2 |
| hypothetical protein | SAMN02910353_01631 | Not Available | + | 1878907 - 1880016 | 42720.8 |
| hypothetical protein | SAMN02910353_01632 | Not Available | + | 1880017 - 1880208 | 6959.49 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.