Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Eubacteriales
Family
Oscillospiraceae
Genus
Ruminococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Eubacteriales |
| Family | Oscillospiraceae |
| Genus | Ruminococcus |
| Species | Ruminococcus sp. YRD2003 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | 39 |
| Temperature range | Mesophilic |
| Habitat | Animal intestinal microflora |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Genome Summary
Ruminococcus sp. YRD2003
Accession NumberFNZT00000000.1
Gene Summary
Adenine Count
886534 bp
Thymine Count
905752 bp
Guanine Count
874295 bp
Cytosine Count
891534 bp
Genome Length
3560550 bp
Protein-coding Genes
3001 genes
Non-Coding Genes
113 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| impb/mucb/samb family protein | SAMN02910353_01613 | Not Available | - | 1859453 - 1860184 | 27496.8 |
| hypothetical protein | SAMN02910353_01614 | Not Available | + | 1860797 - 1861714 | 34102.2 |
| hypothetical protein | SAMN02910353_01615 | Not Available | + | 1861805 - 1862362 | 21719.2 |
| hypothetical protein | SAMN02910353_01616 | Not Available | - | 1863662 - 1864402 | 27688.5 |
| 16s rrna pseudouridine516 synthase | SAMN02910353_01617 | Not Available | + | 1864704 - 1865315 | 23215.9 |
| putative esterase | SAMN02910353_01618 | Not Available | + | 1865312 - 1866304 | 37375.3 |
| beta-glucosidase | SAMN02910353_01619 | Not Available | + | 1866440 - 1868332 | 68724.7 |
| hypothetical protein | SAMN02910353_01620 | Not Available | - | 1868545 - 1869621 | 41334.7 |
| pyruvate, water dikinase | SAMN02910353_01621 | Not Available | - | 1869633 - 1871975 | 87115.9 |
| 4-hydroxybenzoate polyprenyltransferase | SAMN02910353_01622 | Not Available | - | 1871981 - 1872877 | 35082.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.